| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| 3MGH_CLOAB | Clostridium acetobutylicum. | Q97EY6 | OrderedLocusNames=CAC2969; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| DPO4_CLOAB | Clostridium acetobutylicum. | Q97MB3 | Name=dinB; OrderedLocusNames=CAC0285; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| 3MGH_CLOAB | Clostridium acetobutylicum. | Q97EY6 | OrderedLocusNames=CAC2969; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| 3MGH_CLOAB | Clostridium acetobutylicum. | Q97EY6 | OrderedLocusNames=CAC2969; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| DPO4_CLOAB | Clostridium acetobutylicum. | Q97MB3 | Name=dinB; OrderedLocusNames=CAC0285; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| LEXA_CLOAB | Clostridium acetobutylicum. | Q97I23 | Name=lexA; OrderedLocusNames=CAC1832; | LexA repressor (EC 3.4.21.88). |
| MUTL_CLOAB | Clostridium acetobutylicum. | Q97I20 | Name=mutL; OrderedLocusNames=CAC1836; | DNA mismatch repair protein mutL. |
| MUTS_CLOAB | Clostridium acetobutylicum. | Q97I19 | Name=mutS; OrderedLocusNames=CAC1837; | DNA mismatch repair protein mutS. |
| NFI_CLOAB | Clostridium acetobutylicum. | Q97M37 | Name=nfi; OrderedLocusNames=CAC0363; | Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V) (DNase V). |
| RADC_CLOAB | Clostridium acetobutylicum. | Q97JN2 | Name=radC; OrderedLocusNames=CAC1241; | DNA repair protein radC homolog. |
| RECA_CLOAB | Clostridium acetobutylicum. | P58254 | Name=recA; OrderedLocusNames=CAC1815; | Protein recA (Recombinase A). |
| RECF_CLOAB | Clostridium acetobutylicum. | Q97N32 | Name=recF; OrderedLocusNames=CAC0004; | DNA replication and repair protein recF. |
| RECO_CLOAB | Clostridium acetobutylicum. | Q97JI4 | Name=recO; OrderedLocusNames=CAC1309; | DNA repair protein recO (Recombination protein O). |
| RECR_CLOAB | Clostridium acetobutylicum. | Q97MR4 | Name=recR; OrderedLocusNames=CAC0127; | Recombination protein recR. |
| RECX_CLOAB | Clostridium acetobutylicum. | Q97GF7 | Name=recX; OrderedLocusNames=CAC2410; | Regulatory protein recX. |
| RUVA_CLOAB | Clostridium acetobutylicum. | Q97GT0 | Name=ruvA; OrderedLocusNames=CAC2285; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_CLOAB | Clostridium acetobutylicum. | Q97GT1 | Name=ruvB; OrderedLocusNames=CAC2284; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVX_CLOAB | Clostridium acetobutylicum. | Q97IG1 | OrderedLocusNames=CAC1680; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB1_CLOAB | Clostridium acetobutylicum. | Q97KH4 | Name=ssb1; OrderedLocusNames=CAC0945; | Single-stranded DNA-binding protein 1 (SSB 1) (Helix-destabilizingprotein 1). |
| SSB2_CLOAB | Clostridium acetobutylicum. | Q97HT8 | Name=ssb2; OrderedLocusNames=CAC1919; | Single-stranded DNA-binding protein 2 (SSB 2) (Helix-destabilizingprotein 2). |
| SSB3_CLOAB | Clostridium acetobutylicum. | Q97CX3 | Name=ssb3; OrderedLocusNames=CAC3723; | Single-stranded DNA-binding protein 3 (SSB 3) (Helix-destabilizingprotein 3). |
| UVRA_CLOAB | Clostridium acetobutylicum. | Q97LQ1 | Name=uvrA; OrderedLocusNames=CAC0503; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_CLOAB | Clostridium acetobutylicum. | Q97LQ2 | Name=uvrB; OrderedLocusNames=CAC0502; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_CLOAB | Clostridium acetobutylicum. | Q97LP6 | Name=uvrC; OrderedLocusNames=CAC0508; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |