| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| 3MGH_CLOPE | Clostridium perfringens. | Q8XHA9 | OrderedLocusNames=CPE2576; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| DPO4_CLOPE | Clostridium perfringens. | Q8XK37 | Name=dinB; OrderedLocusNames=CPE1566; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| 3MGH_CLOPE | Clostridium perfringens. | Q8XHA9 | OrderedLocusNames=CPE2576; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| 3MGH_CLOPE | Clostridium perfringens. | Q8XHA9 | OrderedLocusNames=CPE2576; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| DPO4_CLOPE | Clostridium perfringens. | Q8XK37 | Name=dinB; OrderedLocusNames=CPE1566; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| LEXA_CLOPE | Clostridium perfringens. | Q8XL81 | Name=lexA; OrderedLocusNames=CPE1161; | LexA repressor (EC 3.4.21.88). |
| MUTL_CLOPE | Clostridium perfringens. | Q8XL86 | Name=mutL; OrderedLocusNames=CPE1156; | DNA mismatch repair protein mutL. |
| MUTS_CLOPE | Clostridium perfringens. | Q8XL87 | Name=mutS; OrderedLocusNames=CPE1155; | DNA mismatch repair protein mutS. |
| RADC_CLOPE | Clostridium perfringens. | Q8XIH5 | Name=radC; OrderedLocusNames=CPE2144; | DNA repair protein radC homolog. |
| RECA_CLOPE | Clostridium perfringens. | P94666 | Name=recA; OrderedLocusNames=CPE1673; | Protein recA (Recombinase A). |
| RECF_CLOPE | Clostridium perfringens. | Q8XPF9 | Name=recF; OrderedLocusNames=CPE0004; | DNA replication and repair protein recF. |
| RECO_CLOPE | Clostridium perfringens. | Q8XIU9 | Name=recO; OrderedLocusNames=CPE2014; | DNA repair protein recO (Recombination protein O). |
| RECR_CLOPE | Clostridium perfringens. | Q8XPB8 | Name=recR; OrderedLocusNames=CPE0047; | Recombination protein recR. |
| RECX_CLOPE | Clostridium perfringens. | Q8XJ38 | Name=recX; OrderedLocusNames=CPE1923; | Regulatory protein recX. |
| RUVA_CLOPE | Clostridium perfringens. | Q8XJ13 | Name=ruvA; OrderedLocusNames=CPE1948; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_CLOPE | Clostridium perfringens. | Q8XJ14 | Name=ruvB; OrderedLocusNames=CPE1947; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVX_CLOPE | Clostridium perfringens. | Q8XJH8 | OrderedLocusNames=CPE1778; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_CLOPE | Clostridium perfringens. | Q8XH44 | Name=ssb; OrderedLocusNames=CPE2641; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UNG_CLOPE | Clostridium perfringens. | Q8XNR7 | Name=ung; OrderedLocusNames=CPE0265; | Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). |
| UVRA_CLOPE | Clostridium perfringens. | Q8XNI5 | Name=uvrA; OrderedLocusNames=CPE0348; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_CLOPE | Clostridium perfringens. | Q46323 | Name=uvrB; OrderedLocusNames=CPE0303; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_CLOPE | Clostridium perfringens. | Q8XNI1 | Name=uvrC; OrderedLocusNames=CPE0352; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |
| UVSE_CLOPE | Clostridium perfringens. | Q8XIP3 | Name=uvsE; OrderedLocusNames=CPE2072; | UV DNA damage endonuclease (EC 3.-.-.-) (UV-endonuclease) (UVED). |