| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| DNLJ_TREPA | Treponema pallidum. | O83642 | Name=ligA; Synonyms=lig; OrderedLocusNames=TP0634; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_TREPA | Treponema pallidum. | P74933 O83143 | Name=polA; OrderedLocusNames=TP0105; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| END3_TREPA | Treponema pallidum. | O83754 | Name=nth; OrderedLocusNames=TP0775; | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site)lyase). |
| DNLJ_TREPA | Treponema pallidum. | O83642 | Name=ligA; Synonyms=lig; OrderedLocusNames=TP0634; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_TREPA | Treponema pallidum. | P74933 O83143 | Name=polA; OrderedLocusNames=TP0105; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| END3_TREPA | Treponema pallidum. | O83754 | Name=nth; OrderedLocusNames=TP0775; | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site)lyase). |
| MUTL_TREPA | Treponema pallidum. | O83325 | Name=mutL; OrderedLocusNames=TP0303; | DNA mismatch repair protein mutL. |
| MUTS_TREPA | Treponema pallidum. | O83348 | Name=mutS; OrderedLocusNames=TP0328; | DNA mismatch repair protein mutS. |
| RADA_TREPA | Treponema pallidum. | O83985 | Name=radA; Synonyms=sms; OrderedLocusNames=TP1022; | DNA repair protein radA homolog (DNA repair protein sms homolog). |
| RECA_TREPA | Treponema pallidum. | O83690 | Name=recA; OrderedLocusNames=TP0692; | Protein recA (Recombinase A). |
| RECF_TREPA | Treponema pallidum. | O83049 | Name=recF; OrderedLocusNames=TP0003; | DNA replication and repair protein recF. |
| RECG_TREPA | Treponema pallidum. | P96130 | Name=recG; OrderedLocusNames=TP0687; | ATP-dependent DNA helicase recG (EC 3.6.1.-). |
| RECN_TREPA | Treponema pallidum. | O83456 | Name=recN; OrderedLocusNames=TP0442; | DNA repair protein recN (Recombination protein N). |
| RECR_TREPA | Treponema pallidum. | O83969 | Name=recR; OrderedLocusNames=TP1004; | Recombination protein recR. |
| RECX_TREPA | Treponema pallidum. | O83986 | Name=recX; OrderedLocusNames=TP1023; | Regulatory protein recX. |
| RUVA_TREPA | Treponema pallidum. | O83554 | Name=ruvA; OrderedLocusNames=TP0543; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_TREPA | Treponema pallidum. | P96115 O83197 | Name=ruvB; OrderedLocusNames=TP0162; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_TREPA | Treponema pallidum. | O83530 | Name=ruvC; OrderedLocusNames=TP0517; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| SSB_TREPA | Treponema pallidum. | O83101 | Name=ssb; OrderedLocusNames=TP0062; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UVRA_TREPA | Treponema pallidum. | O83527 | Name=uvrA; OrderedLocusNames=TP0514; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_TREPA | Treponema pallidum. | O83154 | Name=uvrB; OrderedLocusNames=TP0116; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_TREPA | Treponema pallidum. | O83485 | Name=uvrC; OrderedLocusNames=TP0472; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |