| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| DPO4_PSEPK | Pseudomonas putida (strain KT2440). | Q88NK4 | Name=dinB; Synonyms=dinP; OrderedLocusNames=PP1203; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| DPO4_PSEPK | Pseudomonas putida (strain KT2440). | Q88NK4 | Name=dinB; Synonyms=dinP; OrderedLocusNames=PP1203; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| FPG_PSEPK | Pseudomonas putida (strain KT2440). | Q88CQ5 | Name=mutM; Synonyms=fpg; OrderedLocusNames=PP5125; | Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM)(EC 4.2.99.18) (AP lyase mutM). |
| MUTL_PSEPK | Pseudomonas putida (strain KT2440). | Q88DD1 | Name=mutL; OrderedLocusNames=PP4896; | DNA mismatch repair protein mutL. |
| MUTS_PSEPK | Pseudomonas putida (strain KT2440). | Q88ME7 | Name=mutS; OrderedLocusNames=PP1626; | DNA mismatch repair protein mutS. |
| RADC_PSEPK | Pseudomonas putida (strain KT2440). | Q88C97 | Name=radC; OrderedLocusNames=PP5284; | DNA repair protein radC homolog. |
| RECA_PSEPK | Pseudomonas putida (strain KT2440). | Q88ME4 | Name=recA; OrderedLocusNames=PP1629; | Protein recA (Recombinase A). |
| RECF_PSEPK | Pseudomonas putida (strain KT2440). | Q88RW7 | Name=recF; OrderedLocusNames=PP0012; | DNA replication and repair protein recF. |
| RECO_PSEPK | Pseudomonas putida (strain KT2440). | Q88MY3 | Name=recO; OrderedLocusNames=PP1435; | DNA repair protein recO (Recombination protein O). |
| RECR_PSEPK | Pseudomonas putida (strain KT2440). | Q88F32 | Name=recR; OrderedLocusNames=PP4267; | Recombination protein recR. |
| RECX_PSEPK | Pseudomonas putida (strain KT2440). | Q88ME3 | Name=recX; OrderedLocusNames=PP1630; | Regulatory protein recX. |
| RUVA_PSEPK | Pseudomonas putida (strain KT2440). | Q88NJ1 | Name=ruvA; OrderedLocusNames=PP1216; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_PSEPK | Pseudomonas putida (strain KT2440). | Q88NJ0 | Name=ruvB; OrderedLocusNames=PP1217; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_PSEPK | Pseudomonas putida (strain KT2440). | Q88NJ2 | Name=ruvC; OrderedLocusNames=PP1215; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| RUVX_PSEPK | Pseudomonas putida (strain KT2440). | Q88D32 | OrderedLocusNames=PP4996; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_PSEPK | Pseudomonas putida (strain KT2440). | Q88QK5 | Name=ssb; OrderedLocusNames=PP0485; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UNG_PSEPK | Pseudomonas putida (strain KT2440). | Q88N05 | Name=ung; OrderedLocusNames=PP1413; | Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). |
| UVRA_PSEPK | Pseudomonas putida (strain KT2440). | Q88QK7 | Name=uvrA; OrderedLocusNames=PP0483; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRC_PSEPK | Pseudomonas putida (strain KT2440). | Q88FJ7 | Name=uvrC; OrderedLocusNames=PP4098; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |
| Y972_PSEPK | Pseudomonas putida (strain KT2440). | Q88P81 | OrderedLocusNames=PP0972; | UPF0213 protein PP0972. |