| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| 3MGH_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98DR6 | OrderedLocusNames=mll4583; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| 3MGH_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98DR6 | OrderedLocusNames=mll4583; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| 3MGH_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98DR6 | OrderedLocusNames=mll4583; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| FPG_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98BG6 | Name=mutM; Synonyms=fpg; OrderedLocusNames=mll5585; | Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (FAPY-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM)(EC 4.2.99.18) (AP lyase mutM). |
| LEXA_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98MD2 | Name=lexA; OrderedLocusNames=mlr0626; | LexA repressor (EC 3.4.21.88). |
| MUTL_RHILO | Rhizobium loti (Mesorhizobium loti). | Q983L2 | Name=mutL; OrderedLocusNames=mll8278; | DNA mismatch repair protein mutL. |
| MUTS_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98C21 | Name=mutS; OrderedLocusNames=mll5328; | DNA mismatch repair protein mutS. |
| RECA_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98NQ6 | Name=recA; OrderedLocusNames=mlr0030; | Protein recA (Recombinase A). |
| RECF_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98BH1 | Name=recF; OrderedLocusNames=mll5578; | DNA replication and repair protein recF. |
| RECO_RHILO | Rhizobium loti (Mesorhizobium loti). | Q985A3 | Name=recO; OrderedLocusNames=mlr7769; | DNA repair protein recO (Recombination protein O). |
| RECR_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98BM4 | Name=recR; OrderedLocusNames=mlr5510; | Recombination protein recR. |
| RUVA_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98F75 | Name=ruvA; OrderedLocusNames=mll3898; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98F76 | Name=ruvB; OrderedLocusNames=mll3895; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98F72 | Name=ruvC; OrderedLocusNames=mll3901; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| RUVX_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98M90 | OrderedLocusNames=mlr0681; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98M41 | Name=ssb; OrderedLocusNames=mll0743; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UVRA_RHILO | Rhizobium loti (Mesorhizobium loti). | Q98M36 | Name=uvrA; OrderedLocusNames=mlr0750; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |