| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| 3MG1_ECOLI | Escherichia coli. | P05100 | Name=tag; OrderedLocusNames=b3549; | DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNAglycosylase I, constitutive) (TAG I) (DNA-3-methyladenine glycosidaseI). |
| 3MG2_ECOLI | Escherichia coli. | P04395 | Name=alkA; Synonyms=aidA; OrderedLocusNames=b2068; | DNA-3-methyladenine glycosylase II (EC 3.2.2.21) (3-methyladenine-DNAglycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidaseII). |
| ADA_ECOLI | Escherichia coli. | P06134 Q47032 | Name=ada; OrderedLocusNames=b2213; | Regulatory protein ada (Regulatory protein of adaptative response)[Contains: Methylated-DNA--protein-cysteine methyltransferase(EC 2.1.1.63) (O-6-methylguanine-DNA alkyltransferase)]. |
| ALKB_ECOLI | Escherichia coli. | P05050 | Name=alkB; Synonyms=aidD; OrderedLocusNames=b2212; | Alkylated DNA repair protein alkB. |
| CHO_ECOLI | Escherichia coli. | P76213 | Name=cho; OrderedLocusNames=b1741; | Excinuclease cho (EC 3.1.25.-) (Endonuclease cho) (UvrC homologprotein). |
| DING_ECOLI | Escherichia coli. | P27296 | Name=dinG; Synonyms=rarB; OrderedLocusNames=b0799; | Probable ATP-dependent helicase dinG (EC 3.6.1.-) (DNA-damage-inducible protein G). |
| DINI_ECOLI | Escherichia coli. | P0ABR1 Q47143 Q9R2Y7 | Name=dinI; OrderedLocusNames=b1061; | DNA-damage-inducible protein I. |
| DNLJ_ECOLI | Escherichia coli. | P15042 P78197 P78198 | Name=ligA; Synonyms=dnaL, lig, lop, pdeC; OrderedLocusNames=b2411; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_ECOLI | Escherichia coli. | P00582 | Name=polA; Synonyms=resA; OrderedLocusNames=b3863; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| DPO2_ECOLI | Escherichia coli. | P21189 Q8KMX7 Q8KMX8 | Name=polB; Synonyms=dinA; OrderedLocusNames=b0060; | DNA polymerase II (EC 2.7.7.7) (Pol II). |
| DPO4_ECOLI | Escherichia coli. | Q47155 Q47683 Q8RJ78 Q8RJ81 Q8RJ86 Q8RJ87 Q8RNI5 Q8RNI6 Q8RNI7 Q8RNI8 Q8RNI9 Q8RNJ0 Q8RNJ1 Q8RNJ2 Q8RNJ3 Q8RNJ4 Q8RNJ5 | Name=dinB; Synonyms=dinP; OrderedLocusNames=b0231; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| END3_ECOLI | Escherichia coli. | P0AB83 P20625 | Name=nth; OrderedLocusNames=b1633; | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site)lyase). |
| END4_ECOLI | Escherichia coli. | P0A6C1 P12638 P78086 | Name=nfo; OrderedLocusNames=b2159; | Endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| END8_ECOLI | Escherichia coli. | P50465 | Name=nei; OrderedLocusNames=b0714; | Endonuclease VIII (DNA glycosylase/AP lyase Nei) (EC 3.2.2.-)(EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase Nei). |
| EX1_ECOLI | Escherichia coli. | P04995 | Name=sbcB; Synonyms=cpeA, xonA; OrderedLocusNames=b2011; | Exodeoxyribonuclease I (EC 3.1.11.1) (Exonuclease I) (DNAdeoxyribophosphodiesterase) (dRPase). |
| EX3_ECOLI | Escherichia coli. | P09030 | Name=xthA; Synonyms=xth; OrderedLocusNames=b1749; | Exodeoxyribonuclease III (EC 3.1.11.2) (Exonuclease III) (EXO III) (APendonuclease VI). |
| EX5A_ECOLI | Escherichia coli. | P04993 Q59378 | Name=recD; OrderedLocusNames=b2819; | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) (ExodeoxyribonucleaseV 67 kDa polypeptide). |
| EX5B_ECOLI | Escherichia coli. | P08394 | Name=recB; Synonyms=rorA; OrderedLocusNames=b2820; | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) (ExodeoxyribonucleaseV 135 kDa polypeptide). |
| EX5C_ECOLI | Escherichia coli. | P07648 | Name=recC; OrderedLocusNames=b2822; | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) (ExodeoxyribonucleaseV 125 kDa polypeptide). |
| EXOX_ECOLI | Escherichia coli. | P0AEK0 P76281 | Name=exoX; OrderedLocusNames=b1844; | Exodeoxyribonuclease X (EC 3.1.11.-) (Exonuclease X) (Exo X). |
| 3MG1_ECOLI | Escherichia coli. | P05100 | Name=tag; OrderedLocusNames=b3549; | DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNAglycosylase I, constitutive) (TAG I) (DNA-3-methyladenine glycosidaseI). |
| 3MG2_ECOLI | Escherichia coli. | P04395 | Name=alkA; Synonyms=aidA; OrderedLocusNames=b2068; | DNA-3-methyladenine glycosylase II (EC 3.2.2.21) (3-methyladenine-DNAglycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidaseII). |
| 3MG1_ECOLI | Escherichia coli. | P05100 | Name=tag; OrderedLocusNames=b3549; | DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNAglycosylase I, constitutive) (TAG I) (DNA-3-methyladenine glycosidaseI). |
| 3MG2_ECOLI | Escherichia coli. | P04395 | Name=alkA; Synonyms=aidA; OrderedLocusNames=b2068; | DNA-3-methyladenine glycosylase II (EC 3.2.2.21) (3-methyladenine-DNAglycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidaseII). |
| ADA_ECOLI | Escherichia coli. | P06134 Q47032 | Name=ada; OrderedLocusNames=b2213; | Regulatory protein ada (Regulatory protein of adaptative response)[Contains: Methylated-DNA--protein-cysteine methyltransferase(EC 2.1.1.63) (O-6-methylguanine-DNA alkyltransferase)]. |
| ALKB_ECOLI | Escherichia coli. | P05050 | Name=alkB; Synonyms=aidD; OrderedLocusNames=b2212; | Alkylated DNA repair protein alkB. |
| CHO_ECOLI | Escherichia coli. | P76213 | Name=cho; OrderedLocusNames=b1741; | Excinuclease cho (EC 3.1.25.-) (Endonuclease cho) (UvrC homologprotein). |
| DING_ECOLI | Escherichia coli. | P27296 | Name=dinG; Synonyms=rarB; OrderedLocusNames=b0799; | Probable ATP-dependent helicase dinG (EC 3.6.1.-) (DNA-damage-inducible protein G). |
| DINI_ECOLI | Escherichia coli. | P0ABR1 Q47143 Q9R2Y7 | Name=dinI; OrderedLocusNames=b1061; | DNA-damage-inducible protein I. |
| DNLJ_ECOLI | Escherichia coli. | P15042 P78197 P78198 | Name=ligA; Synonyms=dnaL, lig, lop, pdeC; OrderedLocusNames=b2411; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_ECOLI | Escherichia coli. | P00582 | Name=polA; Synonyms=resA; OrderedLocusNames=b3863; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| DPO2_ECOLI | Escherichia coli. | P21189 Q8KMX7 Q8KMX8 | Name=polB; Synonyms=dinA; OrderedLocusNames=b0060; | DNA polymerase II (EC 2.7.7.7) (Pol II). |
| DPO4_ECOLI | Escherichia coli. | Q47155 Q47683 Q8RJ78 Q8RJ81 Q8RJ86 Q8RJ87 Q8RNI5 Q8RNI6 Q8RNI7 Q8RNI8 Q8RNI9 Q8RNJ0 Q8RNJ1 Q8RNJ2 Q8RNJ3 Q8RNJ4 Q8RNJ5 | Name=dinB; Synonyms=dinP; OrderedLocusNames=b0231; | DNA polymerase IV (EC 2.7.7.7) (Pol IV). |
| END3_ECOLI | Escherichia coli. | P0AB83 P20625 | Name=nth; OrderedLocusNames=b1633; | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site)lyase). |
| END4_ECOLI | Escherichia coli. | P0A6C1 P12638 P78086 | Name=nfo; OrderedLocusNames=b2159; | Endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| END8_ECOLI | Escherichia coli. | P50465 | Name=nei; OrderedLocusNames=b0714; | Endonuclease VIII (DNA glycosylase/AP lyase Nei) (EC 3.2.2.-)(EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase Nei). |
| EX1_ECOLI | Escherichia coli. | P04995 | Name=sbcB; Synonyms=cpeA, xonA; OrderedLocusNames=b2011; | Exodeoxyribonuclease I (EC 3.1.11.1) (Exonuclease I) (DNAdeoxyribophosphodiesterase) (dRPase). |
| EX3_ECOLI | Escherichia coli. | P09030 | Name=xthA; Synonyms=xth; OrderedLocusNames=b1749; | Exodeoxyribonuclease III (EC 3.1.11.2) (Exonuclease III) (EXO III) (APendonuclease VI). |
| EX5A_ECOLI | Escherichia coli. | P04993 Q59378 | Name=recD; OrderedLocusNames=b2819; | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) (ExodeoxyribonucleaseV 67 kDa polypeptide). |
| EX5B_ECOLI | Escherichia coli. | P08394 | Name=recB; Synonyms=rorA; OrderedLocusNames=b2820; | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) (ExodeoxyribonucleaseV 135 kDa polypeptide). |
| EX5C_ECOLI | Escherichia coli. | P07648 | Name=recC; OrderedLocusNames=b2822; | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) (ExodeoxyribonucleaseV 125 kDa polypeptide). |
| EXOX_ECOLI | Escherichia coli. | P0AEK0 P76281 | Name=exoX; OrderedLocusNames=b1844; | Exodeoxyribonuclease X (EC 3.1.11.-) (Exonuclease X) (Exo X). |
| FPG_ECOLI | Escherichia coli. | P05523 | Name=mutM; Synonyms=fpg; OrderedLocusNames=b3635; | Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM)(EC 4.2.99.18) (AP lyase mutM). |
| HELD_ECOLI | Escherichia coli. | P15038 P77623 | Name=helD; OrderedLocusNames=b0962; | Helicase IV (EC 3.6.1.-) (75 kDa helicase). |
| IMPC_ECOLI | Escherichia coli. | P0A1G1 P18643 | Name=impC; | Protein impC. |
| LEXA_ECOLI | Escherichia coli. | P0A7C2 P03033 | Name=lexA; Synonyms=exrA, spr, tsl, umuA; OrderedLocusNames=b4043; | LexA repressor (EC 3.4.21.88). |
| MFD_ECOLI | Escherichia coli. | P30958 P77592 | Name=mfd; OrderedLocusNames=b1114; | Transcription-repair coupling factor (EC 3.6.1.-) (TRCF) (ATP-dependent helicase mfd). |
| MODF_ECOLI | Escherichia coli. | P31060 | Name=modF; Synonyms=phrA; OrderedLocusNames=b0760; | Putative molybdenum transport ATP-binding protein modF (Photorepairprotein phrA). |
| MUCA_ECOLI | Escherichia coli. | P0A276 P07376 P14302 | Name=mucA; | Protein mucA (EC 3.4.21.-) [Contains: Protein mucA']. |
| MUCB_ECOLI | Escherichia coli. | P07375 | Name=mucB; | Protein mucB. |
| MUG_ECOLI | Escherichia coli. | P0A9H1 P43342 | Name=mug; OrderedLocusNames=b3068; | G/U mismatch-specific DNA glycosylase (EC 3.2.2.-) (Mismatch-specificuracil DNA-glycosylase) (UDG). |
| MUTH_ECOLI | Escherichia coli. | P06722 Q9R2X2 Q9R3A8 Q9R411 Q9S6P5 Q9S6P6 Q9S6P7 | Name=mutH; Synonyms=mutR, prv; OrderedLocusNames=b2831; | DNA mismatch repair protein mutH (Methyl-directed mismatch repairprotein). |
| MUTL_ECOLI | Escherichia coli. | P23367 | Name=mutL; OrderedLocusNames=b4170; | DNA mismatch repair protein mutL. |
| MUTS_ECOLI | Escherichia coli. | P23909 P71279 | Name=mutS; Synonyms=fdv; OrderedLocusNames=b2733; | DNA mismatch repair protein mutS. |
| MUTT_ECOLI | Escherichia coli. | P08337 | Name=mutT; OrderedLocusNames=b0099; | Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (EC 3.6.1.-) (dGTP pyrophosphohydrolase). |
| MUTY_ECOLI | Escherichia coli. | P17802 | Name=mutY; Synonyms=micA; OrderedLocusNames=b2961; | A/G-specific adenine glycosylase (EC 3.2.2.-). |
| NFI_ECOLI | Escherichia coli. | P68739 P32679 | Name=nfi; OrderedLocusNames=b3998; | Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V) (DNase V). |
| NUDB_ECOLI | Escherichia coli. | P0AFC0 P24236 | Name=nudB; Synonyms=ntpA; OrderedLocusNames=b1865; | dATP pyrophosphohydrolase (EC 3.6.1.-). |
| OGT_ECOLI | Escherichia coli. | P0AFH0 P09168 P78284 | Name=ogt; OrderedLocusNames=b1335; | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase). |
| PHR_ECOLI | Escherichia coli. | P00914 | Name=phrB; Synonyms=phr; OrderedLocusNames=b0708; | Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase)(Photoreactivating enzyme). |
| RADA_ECOLI | Escherichia coli. | P24554 | Name=radA; Synonyms=sms; OrderedLocusNames=b4389; | DNA repair protein radA (DNA repair protein sms). |
| RADC_ECOLI | Escherichia coli. | P25531 | Name=radC; OrderedLocusNames=b3638; | DNA repair protein radC. |
| RECA_ECOLI | Escherichia coli. | P0A7G6 P03017 P26347 P78213 | Name=recA; Synonyms=lexB, recH, rnmB, tif, umuB, zab;OrderedLocusNames=b2699; | Protein recA (Recombinase A). |
| RECF_ECOLI | Escherichia coli. | P0A7H0 P03016 | Name=recF; Synonyms=uvrF; OrderedLocusNames=b3700; | DNA replication and repair protein recF. |
| RECG_ECOLI | Escherichia coli. | P24230 P76721 | Name=recG; OrderedLocusNames=b3652; | ATP-dependent DNA helicase recG (EC 3.6.1.-). |
| RECJ_ECOLI | Escherichia coli. | P21893 Q46823 | Name=recJ; OrderedLocusNames=b2892; | Single-stranded-DNA-specific exonuclease recJ (EC 3.1.-.-). |
| RECN_ECOLI | Escherichia coli. | P05824 P76602 | Name=recN; Synonyms=radB; OrderedLocusNames=b2616; | DNA repair protein recN (Recombination protein N). |
| RECO_ECOLI | Escherichia coli. | P0A7H3 P15027 P76589 | Name=recO; OrderedLocusNames=b2565; | DNA repair protein recO (Recombination protein O). |
| RECQ_ECOLI | Escherichia coli. | P15043 P76762 Q6BEZ3 | Name=recQ; OrderedLocusNames=b3822; | ATP-dependent DNA helicase recQ (EC 3.6.1.-). |
| RECR_ECOLI | Escherichia coli. | P0A7H6 P12727 | Name=recR; OrderedLocusNames=b0472; | Recombination protein recR. |
| RECX_ECOLI | Escherichia coli. | P33596 P77798 | Name=recX; Synonyms=oraA; OrderedLocusNames=b2698; | Regulatory protein recX (Protein oraA). |
| REP_ECOLI | Escherichia coli. | P09980 Q6BF05 | Name=rep; OrderedLocusNames=b3778; | ATP-dependent DNA helicase rep (EC 3.6.1.-). |
| RUS_ECOLI | Escherichia coli. | P0AG74 P40116 | Name=rusA; Synonyms=rus; OrderedLocusNames=b0550; | Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) (Hollidayjunction nuclease rusA) (Holliday juction resolvase). |
| RUVA_ECOLI | Escherichia coli. | P0A809 P08576 | Name=ruvA; OrderedLocusNames=b1861; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_ECOLI | Escherichia coli. | P0A812 P08577 | Name=ruvB; OrderedLocusNames=b1860; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_ECOLI | Escherichia coli. | P0A814 P24239 | Name=ruvC; OrderedLocusNames=b1863; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| RUVX_ECOLI | Escherichia coli. | P0A8I1 P52050 | Name=yqgF; OrderedLocusNames=b2949; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSBR_ECOLI | Escherichia coli. | P28045 | Name=ssb; | Plasmid-derived single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein). |
| SSB_ECOLI | Escherichia coli. | P0AGE0 P02339 | Name=ssb; Synonyms=exrB, lexC; OrderedLocusNames=b4059; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| SULA_ECOLI | Escherichia coli. | P0AFZ5 P03840 P08846 P71224 | Name=sulA; Synonyms=sfiA; OrderedLocusNames=b0958; | Cell division inhibitor. |
| UMUC_ECOLI | Escherichia coli. | P04152 | Name=umuC; OrderedLocusNames=b1184; | Protein umuC. |
| UMUD_ECOLI | Escherichia coli. | P0AG11 P04153 | Name=umuD; OrderedLocusNames=b1183; | Protein umuD (EC 3.4.21.-) [Contains: Protein umuD']. |
| UNG_ECOLI | Escherichia coli. | P12295 | Name=ung; OrderedLocusNames=b2580; | Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). |
| UVP1_ECOLI | Escherichia coli. | P18957 | Name=uvp1; | Protein uvp1. |
| UVRA_ECOLI | Escherichia coli. | P0A698 P07671 P76788 | Name=uvrA; Synonyms=dinE; OrderedLocusNames=b4058; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_ECOLI | Escherichia coli. | P0A8F8 P07025 | Name=uvrB; OrderedLocusNames=b0779; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_ECOLI | Escherichia coli. | P0A8G0 P07028 P76311 Q8XBD5 | Name=uvrC; OrderedLocusNames=b1913; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |
| UVRD_ECOLI | Escherichia coli. | P03018 P76758 Q47709 | Name=uvrD; Synonyms=mutU, pdeB, rad, recL; OrderedLocusNames=b3813; | DNA helicase II (EC 3.6.1.-). |
| VSR_ECOLI | Escherichia coli. | P09184 | Name=vsr; OrderedLocusNames=b1960; | Very short patch repair protein (EC 3.1.-.-) (DNA mismatchendonuclease) (Vsr mismatch endonuclease) (V.EcoKDcm). |
| YBAZ_ECOLI | Escherichia coli. | P0AFP2 P75707 P77119 | Name=ybaZ; OrderedLocusNames=b0454; | Hypothetical protein ybaZ. |
| YEES_ECOLI | Escherichia coli. | P76362 O07990 O07993 | Name=yeeS; OrderedLocusNames=b2002; | Putative radC-like protein yeeS. |
| YFJY_ECOLI | Escherichia coli. | P52140 | Name=yfjY; OrderedLocusNames=b2644; | Putative radC-like protein yfjY. |
| YHBQ_ECOLI | Escherichia coli. | P45472 | Name=yhbQ; OrderedLocusNames=b3155; | UPF0213 protein yhbQ. |
| YICF_ECOLI | Escherichia coli. | P25772 P78120 | Name=yicF; OrderedLocusNames=b3647; | Hypothetical DNA ligase-like protein yicF. |
| YKFG_ECOLI | Escherichia coli. | Q47685 | Name=ykfG; OrderedLocusNames=b0247; | Putative radC-like protein ykfG. |
