| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| CLPB_AQUAE | Aquifex aeolicus. | O67588 | Name=clpB; OrderedLocusNames=AQ_1672; | Chaperone clpB. |
| DNLI_AQUAE | Aquifex aeolicus. | O67398 | Name=lig; OrderedLocusNames=AQ_1394; | Probable DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase[ATP]). |
| DNLJ_AQUAE | Aquifex aeolicus. | O66880 | Name=ligA; OrderedLocusNames=AQ_633; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_AQUAE | Aquifex aeolicus. | O67779 | Name=polA; OrderedLocusNames=AQ_1967; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| END4_AQUAE | Aquifex aeolicus. | O67551 | Name=nfo; OrderedLocusNames=AQ_1629; | Probable endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| CLPB_AQUAE | Aquifex aeolicus. | O67588 | Name=clpB; OrderedLocusNames=AQ_1672; | Chaperone clpB. |
| DNLI_AQUAE | Aquifex aeolicus. | O67398 | Name=lig; OrderedLocusNames=AQ_1394; | Probable DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase[ATP]). |
| DNLJ_AQUAE | Aquifex aeolicus. | O66880 | Name=ligA; OrderedLocusNames=AQ_633; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_AQUAE | Aquifex aeolicus. | O67779 | Name=polA; OrderedLocusNames=AQ_1967; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| END4_AQUAE | Aquifex aeolicus. | O67551 | Name=nfo; OrderedLocusNames=AQ_1629; | Probable endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| MUTL_AQUAE | Aquifex aeolicus. | O67518 | Name=mutL; OrderedLocusNames=AQ_1578; | DNA mismatch repair protein mutL. |
| MUTS_AQUAE | Aquifex aeolicus. | O66652 | Name=mutS; Synonyms=mutS1; OrderedLocusNames=AQ_308; | DNA mismatch repair protein mutS. |
| NFI_AQUAE | Aquifex aeolicus. | O66824 | Name=nfi; OrderedLocusNames=AQ_548; | Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V) (DNase V). |
| OGG1_AQUAE | Aquifex aeolicus. | O66612 | Name=ogg; OrderedLocusNames=AQ_251; | Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNAglycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase(EC 4.2.99.18) (AP lyase)]. |
| RADA_AQUAE | Aquifex aeolicus. | O66827 | Name=radA; Synonyms=sms; OrderedLocusNames=AQ_552; | DNA repair protein radA homolog (DNA repair protein sms homolog). |
| RADC_AQUAE | Aquifex aeolicus. | O67541 | Name=radC; OrderedLocusNames=AQ_1610; | DNA repair protein radC homolog. |
| RECA_AQUAE | Aquifex aeolicus. | O67905 | Name=recA; OrderedLocusNames=AQ_2150; | Protein recA (Recombinase A). |
| RECG_AQUAE | Aquifex aeolicus. | O67837 | Name=recG; OrderedLocusNames=AQ_2053; | ATP-dependent DNA helicase recG (EC 3.6.1.-). |
| RECN_AQUAE | Aquifex aeolicus. | O66834 | Name=recN; OrderedLocusNames=AQ_561; | DNA repair protein recN (Recombination protein N). |
| RECR_AQUAE | Aquifex aeolicus. | O67455 | Name=recR; OrderedLocusNames=AQ_1478; | Recombination protein recR. |
| RUVX_AQUAE | Aquifex aeolicus. | O67469 | OrderedLocusNames=AQ_1498; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_AQUAE | Aquifex aeolicus. | O66475 | Name=ssb; OrderedLocusNames=AQ_064; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UVRA_AQUAE | Aquifex aeolicus. | O66911 | Name=uvrA; OrderedLocusNames=AQ_686; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_AQUAE | Aquifex aeolicus. | O67708 | Name=uvrB; OrderedLocusNames=AQ_1856; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_AQUAE | Aquifex aeolicus. | O67887 | Name=uvrC; OrderedLocusNames=AQ_2126; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |
