| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| CLPC_CHLTR | Chlamydia trachomatis. | O84288 | Name=clpC; OrderedLocusNames=CT286; | Probable ATP-dependent Clp protease ATP-binding subunit. |
| DNLJ_CHLTR | Chlamydia trachomatis. | O84148 | Name=ligA; OrderedLocusNames=CT146; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| END4_CHLTR | Chlamydia trachomatis. | O84630 | Name=nfo; OrderedLocusNames=CT625; | Probable endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| EX5B_CHLTR | Chlamydia trachomatis. | O84645 | Name=recB; OrderedLocusNames=CT639; | Exodeoxyribonuclease V beta chain (EC 3.1.11.5). |
| CLPC_CHLTR | Chlamydia trachomatis. | O84288 | Name=clpC; OrderedLocusNames=CT286; | Probable ATP-dependent Clp protease ATP-binding subunit. |
| DNLJ_CHLTR | Chlamydia trachomatis. | O84148 | Name=ligA; OrderedLocusNames=CT146; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| END4_CHLTR | Chlamydia trachomatis. | O84630 | Name=nfo; OrderedLocusNames=CT625; | Probable endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| EX5B_CHLTR | Chlamydia trachomatis. | O84645 | Name=recB; OrderedLocusNames=CT639; | Exodeoxyribonuclease V beta chain (EC 3.1.11.5). |
| MUTL_CHLTR | Chlamydia trachomatis. | O84579 | Name=mutL; OrderedLocusNames=CT575; | DNA mismatch repair protein mutL. |
| MUTS_CHLTR | Chlamydia trachomatis. | O84797 | Name=mutS; OrderedLocusNames=CT792; | DNA mismatch repair protein mutS. |
| RADA_CHLTR | Chlamydia trachomatis. | O84300 | Name=radA; OrderedLocusNames=CT298; | DNA repair protein radA homolog (DNA repair protein sms homolog). |
| RECA_CHLTR | Chlamydia trachomatis. | P48287 O84656 | Name=recA; OrderedLocusNames=CT650; | Protein recA (Recombinase A). |
| RECF_CHLTR | Chlamydia trachomatis. | O84077 | Name=recF; OrderedLocusNames=CT074; | DNA replication and repair protein recF. |
| RECO_CHLTR | Chlamydia trachomatis. | O84476 | Name=recO; OrderedLocusNames=CT470; | DNA repair protein recO (Recombination protein O). |
| RECR_CHLTR | Chlamydia trachomatis. | O84243 | Name=recR; OrderedLocusNames=CT240; | Recombination protein recR. |
| RUVA_CHLTR | Chlamydia trachomatis. | O84509 | Name=ruvA; OrderedLocusNames=CT501; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_CHLTR | Chlamydia trachomatis. | O84044 | Name=ruvB; OrderedLocusNames=CT040; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_CHLTR | Chlamydia trachomatis. | O84510 | Name=ruvC; OrderedLocusNames=CT502; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| RUVX_CHLTR | Chlamydia trachomatis. | Q46370 O84187 | OrderedLocusNames=CT184; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_CHLTR | Chlamydia trachomatis. | O84048 | Name=ssb; OrderedLocusNames=CT044; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UNG_CHLTR | Chlamydia trachomatis. | O84613 | Name=ung; OrderedLocusNames=CT607; | Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). |
| UVRA_CHLTR | Chlamydia trachomatis. | O84337 | Name=uvrA; OrderedLocusNames=CT333; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_CHLTR | Chlamydia trachomatis. | O84590 | Name=uvrB; OrderedLocusNames=CT586; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_CHLTR | Chlamydia trachomatis. | O84796 | Name=uvrC; OrderedLocusNames=CT791; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |
