| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| 3MGH_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z847 | OrderedLocusNames=CPn0505, CP0248, CPJ0505, CpB0526; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| CLPC_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z8A6 Q9JSE9 Q9K297 | Name=clpC; OrderedLocusNames=CPn0437, CP0316, CpB0454; | Probable ATP-dependent Clp protease ATP-binding subunit. |
| DNLJ_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z934 Q9JQ74 | Name=ligA; OrderedLocusNames=CPn0149, CP0624, CpB0150; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| END4_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7H3 Q9JQ87 | Name=nfo; OrderedLocusNames=CPn0732, CP0014, CpB0760; | Probable endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| EX5B_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7G7 Q9JSB1 Q9K2F2 | Name=recB; OrderedLocusNames=CPn0738, CP0007, CpB0767; | Exodeoxyribonuclease V beta chain (EC 3.1.11.5). |
| 3MGH_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z847 | OrderedLocusNames=CPn0505, CP0248, CPJ0505, CpB0526; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| 3MGH_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z847 | OrderedLocusNames=CPn0505, CP0248, CPJ0505, CpB0526; | Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-). |
| CLPC_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z8A6 Q9JSE9 Q9K297 | Name=clpC; OrderedLocusNames=CPn0437, CP0316, CpB0454; | Probable ATP-dependent Clp protease ATP-binding subunit. |
| DNLJ_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z934 Q9JQ74 | Name=ligA; OrderedLocusNames=CPn0149, CP0624, CpB0150; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| END4_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7H3 Q9JQ87 | Name=nfo; OrderedLocusNames=CPn0732, CP0014, CpB0760; | Probable endonuclease IV (EC 3.1.21.2) (Endodeoxyribonuclease IV). |
| EX5B_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7G7 Q9JSB1 Q9K2F2 | Name=recB; OrderedLocusNames=CPn0738, CP0007, CpB0767; | Exodeoxyribonuclease V beta chain (EC 3.1.11.5). |
| MUTL_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z794 Q9JQ29 | Name=mutL; OrderedLocusNames=CPn0812, CP1059, CpB0841; | DNA mismatch repair protein mutL. |
| MUTS_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z6W5 Q9JS56 | Name=mutS; OrderedLocusNames=CPn0941, CP0920, CpB0975; | DNA mismatch repair protein mutS. |
| RADA_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z9C8 Q9JQC8 | Name=radA; Synonyms=sms; OrderedLocusNames=CPn0053, CP0722, CpB0054; | DNA repair protein radA homolog (DNA repair protein sms homolog). |
| RECA_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7E4 Q9JQ98 | Name=recA; OrderedLocusNames=CPn0762, CP1110, CpB0790; | Protein recA (Recombinase A). |
| RECO_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7W5 | Name=recO; OrderedLocusNames=CPn0589, CP0159, CPJ0589, CpB0613; | DNA repair protein recO (Recombination protein O). |
| RECR_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z8N9 Q9JQ71 | Name=recR; OrderedLocusNames=CPn0299, CP0459, CpB0308; | Recombination protein recR. |
| RUVA_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7T4 Q9JQH9 | Name=ruvA; OrderedLocusNames=CPn0620, CP0127, CpB0646; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z8F3 Q9JRV2 | Name=ruvB; OrderedLocusNames=CPn0390, CP0365, CpB0402; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7T3 Q9JQH8 | Name=ruvC; OrderedLocusNames=CPn0621, CP0126, CpB0647; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| RUVX_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z8U7 Q9JQK0 Q9K255 | OrderedLocusNames=CPn0237, CP0525, CPJ0237, CpB0243; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z8F7 Q9JQJ1 | Name=ssb; OrderedLocusNames=CPn0386, CP0369, CpB0398; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UNG_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7D3 Q9JQB3 | Name=ung; OrderedLocusNames=CPn0773, CP1099, CpB0801; | Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). |
| UVRA_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z985 Q9JQK9 Q9JSJ5 | Name=uvrA; OrderedLocusNames=CPn0096, CP0678, CpB0096; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z7A5 Q9JQE7 | Name=uvrB; OrderedLocusNames=CPn0801, CP1070, CpB0830; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_CHLPN | Chlamydia pneumoniae (Chlamydophila pneumoniae). | Q9Z6W6 Q9JQA6 | Name=uvrC; OrderedLocusNames=CPn0940, CP0921, CpB0974; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |
