| Protein | Organism Specification | AC Entry | Gene name(s) | Description |
| DNLJ_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZLM1 | Name=ligA; Synonyms=lig; OrderedLocusNames=JHP0558; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJE9 | Name=polA; OrderedLocusNames=JHP1363; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| DNLJ_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZLM1 | Name=ligA; Synonyms=lig; OrderedLocusNames=JHP0558; | DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]). |
| DPO1_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJE9 | Name=polA; OrderedLocusNames=JHP1363; | DNA polymerase I (EC 2.7.7.7) (POL I). |
| MFD_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJ57 | Name=mfd; OrderedLocusNames=JHP1458; | Transcription-repair coupling factor (EC 3.6.1.-) (TRCF) (ATP-dependent helicase mfd). |
| RADA_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZMK9 | Name=radA; Synonyms=sms; OrderedLocusNames=JHP0209; | DNA repair protein radA homolog (DNA repair protein sms homolog). |
| RECA_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZMS7 | Name=recA; OrderedLocusNames=JHP0141; | Protein recA (Recombinase A). |
| RECG_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJA1 | Name=recG; OrderedLocusNames=JHP1412; | ATP-dependent DNA helicase recG (EC 3.6.1.-). |
| RECN_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJ80 | Name=recN; OrderedLocusNames=JHP1434; | DNA repair protein recN (Recombination protein N). |
| RECR_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZKS6 | Name=recR; OrderedLocusNames=JHP0859; | Recombination protein recR. |
| RUVA_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZKW9 | Name=ruvA; OrderedLocusNames=JHP0815; | Holliday junction ATP-dependent DNA helicase ruvA (EC 3.6.1.-). |
| RUVB_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZM57 | Name=ruvB; OrderedLocusNames=JHP0366; | Holliday junction ATP-dependent DNA helicase ruvB (EC 3.6.1.-). |
| RUVC_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZKX3 | Name=ruvC; OrderedLocusNames=JHP0811; | Crossover junction endodeoxyribonuclease ruvC (EC 3.1.22.4) (Hollidayjunction nuclease ruvC) (Holliday juction resolvase ruvC). |
| RUVX_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZMA5 | OrderedLocusNames=JHP0317; | Putative Holliday junction resolvase (EC 3.1.-.-). |
| SSB_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJY2 | Name=ssb; OrderedLocusNames=JHP1166; | Single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein). |
| UNG_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZJN9 | Name=ung; OrderedLocusNames=JHP1266; | Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). |
| UVRA_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZLD6 | Name=uvrA; OrderedLocusNames=JHP0644; | UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A). |
| UVRB_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZKA0 | Name=uvrB; OrderedLocusNames=JHP1041; | UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B). |
| UVRC_HELPJ | Helicobacter pylori J99 (Campylobacter pylori J99). | Q9ZL21 | Name=uvrC; OrderedLocusNames=JHP0760; | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C). |