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Description:
DNA replication and repair protein recF.
Molecular weight: 40776
View which proteins in this organism that is involved with DNA Repair;
classified after biological processes (using data from the GOA project):
DNA repair( GO:0006281 )
Important dates:
25-NOV-2002, integrated into UniProtKB/Swiss-Prot.
01-JUN-2002, sequence version 1.
07-MAR-2006, entry version 20.
Phylogenetic order:
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Agrobacterium.
To calculate the pI (Isoelectric point - the pH where a protein has a neutral charge),
go to this page and enter the protein ID (e.g 3MG_ECOLI): http://us.expasy.org/tools/pi_tool.html
Links to references in other databases for protein RECF_AGRT5:
| Database | Pointer | Add. info#1 | Add. info#2 |
| EMBL | AE008981 | AAL41098.1 | - |
| EMBL | AE007949 | AAK85892.1 | - |
| PIR | AD2585 | AD2585. | |
| PIR | C97367 | C97367. | |
| GenomeReviews | AE007869_GR | AGR_C_109.1 | |
| GenomeReviews | AE008688_GR | Atu0073.1 | |
| HAMAP | MF_00365 | - | 1. |
| InterPro | IPR003593 | AAA_ATPase. | |
| InterPro | IPR001238 | RecF. | |
| InterPro | IPR003395 | SMC_N. | |
| Pfam | PF02463 | SMC_N | 1. |
| SMART | SM00382 | AAA | 1. |
| TIGRFAMs | TIGR00611 | recf | 1. |
| PROSITE | PS00617 | RECF_1 | 1. |
| PROSITE | PS00618 | RECF_2 | 1. |
Keywords:
ATP-binding; Complete proteome; DNA damage; DNA repair; DNA replication; DNA-binding; Nucleotide-binding; SOS response.
References:
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX MEDLINE=21608550; PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P.,
RA Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L.,
RA Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr.,
RA Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C.,
RA Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A.,
RA Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D.,
RA Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M.,
RA Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M.,
RA Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V.,
RA Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX MEDLINE=21608551; PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M.,
RA Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L.,
RA Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F.,
RA Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B.,
RA Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G.,
RA Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
Feature:
CHAIN 1 376 DNA replication and repair protein recF.
/FTId=PRO_0000196391.
NP_BIND 35 42 ATP (Potential).
Comments:
-!- FUNCTION: The recF protein is involved in DNA metabolism; it is
required for DNA replication and normal SOS inducibility. RecF
binds preferentially to single-stranded, linear DNA. It also seems
to bind ATP (By similarity).
-!- SUBCELLULAR LOCATION: Cytoplasm (By similarity).
-!- SIMILARITY: Belongs to the recF family.
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Sequence length: 376
MMTNKVSLSR LKLTDFRNYA AAALVLDERH VVLTGDNGSG KTNLLEAVSF LSPGRGLRRA
VLSDVTRVGA EATGFSIFAD VDGMDGEVAI GTGIEGDGEV VSRRLRLNGT PVKSVDELTD
HLRVLWLTPA MDGLFTGSSS DRRRFLDRLV LSLDPGHGRR ASDFEKAMRG RNRLLSEGRF
DPVWLDGIEK QMAELGISMA VARYEMLGLL KTLIEGRAGN AAFPSATLSL AGFMDDRLNR
PAVDLEDEYG LMLRDGRYRD AAAGRTLDGP HRVDLFVRHA EKNMEAERCS TGEQKALLVG
LVLAHAQLTA NMTGYAPVLL LDEIAAHLDE GRRAALFDLI HALGGQSFMT GTDAAMFSAL
GERAQFFNVS HGGITA