Description:
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5).
Molecular weight: 1195
View which proteins in this organism that is involved with DNA Repair;
classified after biological processes (using data from the GOA project):
DNA repair( GO:0006281 )
Important dates:
30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
01-MAY-1997, sequence version 1.
07-MAR-2006, entry version 44.
Phylogenetic order:
Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacterineae Mycobacteriaceae Mycobacterium Mycobacterium tuberculosis complex.
To calculate the pI (Isoelectric point - the pH where a protein has a neutral charge),
go to this page and enter the protein ID (e.g 3MG_ECOLI): http://us.expasy.org/tools/pi_tool.html
Links to references in other databases for protein EX5C_MYCTU:
| Database | Pointer | Add. info#1 | Add. info#2 |
| EMBL | BX842574 | CAB07120.1 | - |
| EMBL | AE000516 | AAK44883.1 | - |
| PIR | D70612 | D70612. | |
| GenomeReviews | AE000516_GR | MT0659.1 | |
| GenomeReviews | AL123456_GR | Rv0631c.1 | |
| TIGR | MT0659 | -. | |
| TubercuList | Rv0631c | -. | |
| InterPro | IPR006697 | RecC. | |
| Pfam | PF04257 | Exonuc_V_gamma | 1. |
| TIGRFAMs | TIGR01450 | recC | 1. |
Keywords:
ATP-binding; Complete proteome; DNA damage; DNA repair; Endonuclease; Exonuclease; Helicase; Hydrolase; Nuclease; Nucleotide-binding.
References:
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=H37Rv;
RX MEDLINE=98295987; PubMed=9634230; DOI=10.1038/31159;
RA Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M.,
RA Harris D.E., Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III,
RA Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
RA Connor R., Davies R.M., Devlin K., Feltwell T., Gentles S., Hamlin N.,
RA Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J., Moule S.,
RA Murphy L.D., Oliver S., Osborne J., Quail M.A., Rajandream M.A.,
RA Rogers J., Rutter S., Seeger K., Skelton S., Squares S., Squares R.,
RA Sulston J.E., Taylor K., Whitehead S., Barrell B.G.;
RT "Deciphering the biology of Mycobacterium tuberculosis from the
RT complete genome sequence.";
RL Nature 393:537-544(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CDC 1551 / Oshkosh;
RX MEDLINE=22206494; PubMed=12218036;
RX DOI=10.1128/JB.184.19.5479-5490.2002;
RA Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O.,
RA Peterson J.D., DeBoy R.T., Dodson R.J., Gwinn M.L., Haft D.H.,
RA Hickey E.K., Kolonay J.F., Nelson W.C., Umayam L.A., Ermolaeva M.D.,
RA Salzberg S.L., Delcher A., Utterback T.R., Weidman J.F., Khouri H.M.,
RA Gill J., Mikula A., Bishai W., Jacobs W.R. Jr., Venter J.C.,
RA Fraser C.M.;
RT "Whole-genome comparison of Mycobacterium tuberculosis clinical and
RT laboratory strains.";
RL J. Bacteriol. 184:5479-5490(2002).
Feature:
CHAIN 1 1097 Exodeoxyribonuclease V gamma chain.
/FTId=PRO_0000087122.
CONFLICT 497 497 F -> L (in Ref. 2).
Comments:
-!- FUNCTION: Exhibits a wide variety of catalytic activities
including ATP-dependent exonuclease, ATP-stimulated endonuclease,
ATP-dependent helicase and DNA-dependent ATPase activities (By
similarity).
-!- CATALYTIC ACTIVITY: Exonucleolytic cleavage (in the presence of
ATP) in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-
phosphooligonucleotides.
-!- SUBUNIT: Consist of three subunits; recB, recC and recD (By
similarity).
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Sequence length: 1097
MALHLHRAER TDLLADGLGA LLADPQPDPF AQELVLVAAR GVERWLSQRL SLVLGCGPGR
ADGVCAGIAF RNPQSLIAEI TGTLDDDPWS PEALAWPLLA VIDASLDEPW CRTLASHLGH
FATTDAEAEL RRGRRYSVAR RLAGLFASYA RQRPGLLAAW LDGDLGELPG DLAWQPPLWR
ALVTTVGADP PHVRHDKTIA RLRDGPADLP ARLSLFGHTR LACTDVQLLD ALAVHHDLHL
WLPHPSDELW RALAGFQGAD GLLPRRQDTS RRAAQHPLLE TLGRDVRELQ RALPAARATD
EFLGATTKPD TLLGWLQADI AGNAPRPAGR SLSDADRSVQ VHACHGPARQ IDVLREVLLG
LLEDDPTLQP RDIVVMCPDI DTYAPLIVAG FGLGEVAGDC HPAHRLRVRL ADRALTQTNP
LLSVAAELLT IAETRATASQ LLNLAQAAPV RAKFGFADDD LDTITTWVRE SNIRWGFDPT
HRRRYGLDTV VHNTWRFGLD RILTGVAMSE DSQAWLDTAL PLDDVGSNRV ELAGRLAEFV
ERLHHVVGGL SGARPLVAWL DALATGIDLL TACNDGWQRA QVQREFADVL ARAGSRAAPL
LRLPDVRALL DAQLAGRPTR ANFRTGTLTV CTMVPMRSVP HRVVCLVGLD DGVFPRLSHP
DGDDVLAREP MTGERDIRSE DRQLLLDAIG AATQTLVITY TGADERTGQP RPPAVPLAEL
LDALDQTTSA PVRERILVTH PLQPFDRKNV TPGALLGAKP FTFDPAALAA AQAAAGKRCP
PTAFISGRLP APPAADVTLA DLLDFFKDPV KGFFRALDYT LPWDVDTVED SIPVQVDALA
EWTVGERMLR DMLRGLHPDD AAHSEWRRGT LPPGRLGVRR AKEIRNRARD LAAAALAHRD
GHGQAHDVDV DLGDGRRLSG TVTPVFGGRT VSVTYSKLAP KHVLPAWIGL VTLAAQEPGR
EWSALCIGRS KTRNHIARRL FVPPPDPVAV LRELVLLYDA GRREPLPLPL KTSCAWAQAR
RDGQDPYPPA RECWQTNRFR PGDDDAPAHV RAWGPRAPFE VLLGKPRAGE EVAGEETRLG
ALAARLWLPL LAAEGSV