Description:
Hypothetical protein C139.01c in chromosome I.
Molecular weight: 90153
View which proteins in this organism that is involved with DNA Repair;
classified after biological processes (using data from the GOA project):
DNA repair( GO:0006281 )
Important dates:
29-MAR-2004, integrated into UniProtKB/Swiss-Prot.
29-MAR-2004, sequence version 2.
07-FEB-2006, entry version 26.
Phylogenetic order:
Eukaryota Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetales Schizosaccharomycetaceae Schizosaccharomyces.
To calculate the pI (Isoelectric point - the pH where a protein has a neutral charge),
go to this page and enter the protein ID (e.g 3MG_ECOLI): http://us.expasy.org/tools/pi_tool.html
Links to references in other databases for protein YII1_SCHPO:
| Database | Pointer | Add. info#1 | Add. info#2 |
| EMBL | AL132667 | CAB59615.1 | - |
| EMBL | AL353860 | CAB88876.2.1 | - |
| EMBL | D89176 | BAA13838.1 | ALT_FRAME |
| PIR | T37602 | T37602. | |
| GeneDB_Spombe | SPAC139.01c | -.1 | |
| BioCyc | SPOM-XXX-01:SPOM-XXX-01-001990-MONOMER | -.1 | |
| InterPro | IPR000513 | Exo_N_I. | |
| InterPro | IPR006085 | XPG_N. | |
| Pfam | PF00752 | XPG_N | 1. |
| SMART | SM00485 | XPGN | 1. |
Keywords:
Complete proteome; Endonuclease; Hydrolase; Hypothetical protein; Nuclease.
References:
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972;
RX MEDLINE=21848401; PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M.,
RA Collins M., Connor R., Cronin A., Davis P., Feltwell T., Fraser A.,
RA Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G.,
RA Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K.,
RA James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J.,
RA Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C.,
RA Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E.,
RA Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S.,
RA Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K.,
RA Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S.,
RA Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B.,
RA Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S.,
RA Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D.,
RA Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R.,
RA Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B.,
RA Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S.,
RA Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M.,
RA Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G.,
RA Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J.,
RA Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L.,
RA Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J.,
RA Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 448-802.
RC STRAIN=PR745;
RX MEDLINE=98162722; PubMed=9501991; DOI=10.1093/dnares/4.6.363;
RA Yoshioka S., Kato K., Nakai K., Okayama H., Nojima H.;
RT "Identification of open reading frames in Schizosaccharomyces pombe
RT cDNAs.";
RL DNA Res. 4:363-369(1997).
Feature:
CHAIN 1 802 Hypothetical protein C139.01c in
chromosome I.
/FTId=PRO_0000154048.
CONFLICT 608 608 L -> F (in Ref. 2).
CONFLICT 623 623 D -> N (in Ref. 2).
CONFLICT 626 626 I -> M (in Ref. 2).
CONFLICT 649 649 S -> C (in Ref. 2).
CONFLICT 688 688 N -> K (in Ref. 2).
Comments:
-!- SIMILARITY: Belongs to the XPG/RAD2 endonuclease family.
-!- CAUTION: Ref.2 sequence differs from that shown due to frameshifts
in positions 631 and 642.
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Sequence length: 802
MTIRSLNLFI IDKKHQHKSS LSSFQNCKLG IDASFYLTQI IHSFTPQELQ SLAVNGESEY
LQHRISEFLE QLRTENITPI FVFNGIPLTF EASSQLEVPG KQKSHSALTD FEAFDPYDAN
IQRNMYRMDA SGPANYGESK PTLLYTNQRD HLDRLCDQVK FYLDQCNVEY FVAPYLAMAQ
LAYFLNGTSS PYIDAIYGST DLLLFGVKKF ITSMNTSSNV KISSDPSSPS TQTTINSAAK
SSFTWLDGNA LLQDTNGLSW QQFIDSCLLC GTAISPTFPQ IEGTFLIKSA MELVRMFGSA
YRAVLHFAEI FPQPIFQDYL QQYKRAVCFS KFGIVMDTKG LTLPPVPTES VPNDINIYFG
TRLPNEIYFY ISRGLIPCKM IGALVSGCFS DPVSILEQHI GDKASQGTFS GANSGLNPGR
DNAAAVAAVD QRRFVDDLEE IWSQGLNLLT QPLNRFYQAR DIVSLHGHNQ QASLKVMHSY
DPPLYNDTRA WMIYEENLPS YLSSNFLKEE PVVLFDLLRA LNDPVFVKKS FCTEGNIGIK
NPPKHPLSST AEIVLSSCYR FLQIRSFVLT SHQLTSWGCP LLKALENCHL QNQTSVVVLF
ELLRLRQLKE PSLLSSSSAS IADLSITSAT EFLAKVATFL PIKQRPEVSK ISIVDENLLQ
FYQLQTSFGS NLKELMAMIL ASVILNRNVD KSKIDPKLIR KTLPFQNING SLVSGFVVKR
FFEIISKEQE ASSQQENIQK AYEIIEKEFP TIGSAENHIA QFLEFWKTFM EGVKEAENTS
AIGKLVLSKL FLTNQWIFSL GL