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Description:
DNA replication and repair protein recF.
Molecular weight: 40932
View which proteins in this organism that is involved with DNA Repair;
classified after biological processes (using data from the GOA project):
DNA repair( GO:0006281 )
Important dates:
16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
16-JUN-2003, sequence version 1.
07-MAR-2006, entry version 19.
Phylogenetic order:
Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio.
To calculate the pI (Isoelectric point - the pH where a protein has a neutral charge),
go to this page and enter the protein ID (e.g 3MG_ECOLI): http://us.expasy.org/tools/pi_tool.html
Links to references in other databases for protein RECF_VIBPA:
| Database | Pointer | Add. info#1 | Add. info#2 |
| EMBL | BA000031 | BAC58276.1 | - |
| HSSP | P58301 | 1F2T | |
| GenomeReviews | BA000031_GR | VP0013.1 | |
| HAMAP | MF_00365 | - | 1. |
| InterPro | IPR001238 | RecF. | |
| InterPro | IPR003395 | SMC_N. | |
| Pfam | PF02463 | SMC_N | 1. |
| TIGRFAMs | TIGR00611 | recf | 1. |
| PROSITE | PS00617 | RECF_1 | 1. |
| PROSITE | PS00618 | RECF_2 | 1. |
Keywords:
ATP-binding; Complete proteome; DNA damage; DNA repair; DNA replication; DNA-binding; Nucleotide-binding; SOS response.
References:
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RIMD 2210633 / Serotype O3:K6;
RX MEDLINE=22508454; PubMed=12620739; DOI=10.1016/S0140-6736(03)12659-1;
RA Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K.,
RA Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S.,
RA Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.;
RT "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
RT distinct from that of V. cholerae.";
RL Lancet 361:743-749(2003).
Feature:
CHAIN 1 359 DNA replication and repair protein recF.
/FTId=PRO_0000196486.
NP_BIND 30 37 ATP (Potential).
Comments:
-!- FUNCTION: The recF protein is involved in DNA metabolism; it is
required for DNA replication and normal SOS inducibility. RecF
binds preferentially to single-stranded, linear DNA. It also seems
to bind ATP (By similarity).
-!- SUBCELLULAR LOCATION: Cytoplasm (By similarity).
-!- SIMILARITY: Belongs to the recF family.
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Sequence length: 359
MPLSRLIIQQ FRNIKACDIQ LSAGFNFLIG PNGSGKTSVL EAIYLLGHGR SFKSSLTGRV
IQNECDELFV HGRFLNSDQF ELPIGINKQR DGSTEVKIGG QSGQKLAQLA QVLPLQLIHP
EGFDLLTDGP KHRRAFIDWG VFHTEPAFYD AWGRFKRLNK QRNALLKTAS SYRELSYWDQ
EMARLAENIS QWRSLYIEQM KTVAETICQT FLPEFEIQLK YYRGWDKDTP YQEILEKNFE
RDQSLGYTFS GPNKADLRIK VNGTPVEDVL SRGQLKLMVC ALRVAQGQHL TAMTGKQCIY
LIDDFASELD SQRRKRLADC LKETGAQVFV SSITENQIAD MLDDNGKLFH VEHGRIESN