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Description:
DNA repair protein radA homolog (DNA repair protein sms homolog).
Molecular weight: 49235
View which proteins in this organism that is involved with DNA Repair;
classified after biological processes (using data from the GOA project):
DNA repair( GO:0006281 )
Important dates:
30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
01-MAY-1999, sequence version 1.
07-MAR-2006, entry version 37.
Phylogenetic order:
Bacteria Chlamydiae Chlamydiales Chlamydiaceae Chlamydophila.
To calculate the pI (Isoelectric point - the pH where a protein has a neutral charge),
go to this page and enter the protein ID (e.g 3MG_ECOLI): http://us.expasy.org/tools/pi_tool.html
Links to references in other databases for protein RADA_CHLPN:
| Database | Pointer | Add. info#1 | Add. info#2 |
| EMBL | AE001590 | AAD18206.1 | - |
| EMBL | AE002231 | AAF38527.1 | - |
| EMBL | BA000008 | BAA98264.1 | - |
| EMBL | AE017157 | AAP97987.1 | - |
| PIR | C72126 | C72126. | |
| PIR | F86497 | F86497. | |
| GenomeReviews | AE002161_GR | CP0722.1 | |
| GenomeReviews | AE009440_GR | CpB0054.1 | |
| GenomeReviews | AE001363_GR | CPn0053.1 | |
| GenomeReviews | BA000008_GR | radA.1 | |
| TIGR | CP0722 | -. | |
| BioCyc | CPNE115711:CP0722-MONOMER | -.1 | |
| BioCyc | CPNE115713:CPN0053-MONOMER | -.1 | |
| BioCyc | CPNE138677:CPJ0053-MONOMER | -.1 | |
| BioCyc | CPNE182082:CPB0054-MONOMER | -.1 | |
| InterPro | IPR003593 | AAA_ATPase. | |
| InterPro | IPR004504 | RadA. | |
| PRINTS | PR01874 | DNAREPAIRADA. | |
| SMART | SM00382 | AAA | 1. |
| TIGRFAMs | TIGR00416 | sms | 1. |
Keywords:
ATP-binding; Complete proteome; DNA damage; DNA repair; DNA-binding; Metal-binding; Nucleotide-binding; Zinc; Zinc-finger.
References:
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CWL029;
RX MEDLINE=99206606; PubMed=10192388; DOI=10.1038/7716;
RA Kalman S., Mitchell W.P., Marathe R., Lammel C.J., Fan J., Hyman R.W.,
RA Olinger L., Grimwood J., Davis R.W., Stephens R.S.;
RT "Comparative genomes of Chlamydia pneumoniae and C. trachomatis.";
RL Nat. Genet. 21:385-389(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AR39;
RX MEDLINE=20150255; PubMed=10684935; DOI=10.1093/nar/28.6.1397;
RA Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F.,
RA White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J.,
RA Bass S., Linher K.D., Weidman J.F., Khouri H.M., Craven B., Bowman C.,
RA Dodson R.J., Gwinn M.L., Nelson W.C., DeBoy R.T., Kolonay J.F.,
RA McClarty G., Salzberg S.L., Eisen J.A., Fraser C.M.;
RT "Genome sequences of Chlamydia trachomatis MoPn and Chlamydia
RT pneumoniae AR39.";
RL Nucleic Acids Res. 28:1397-1406(2000).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=J138;
RX MEDLINE=20330349; PubMed=10871362; DOI=10.1093/nar/28.12.2311;
RA Shirai M., Hirakawa H., Kimoto M., Tabuchi M., Kishi F., Ouchi K.,
RA Shiba T., Ishii K., Hattori M., Kuhara S., Nakazawa T.;
RT "Comparison of whole genome sequences of Chlamydia pneumoniae J138
RT from Japan and CWL029 from USA.";
RL Nucleic Acids Res. 28:2311-2314(2000).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TW-183;
RA Geng M.M., Schuhmacher A., Muehldorfer I., Bensch K.W., Schaefer K.P.,
RA Schneider S., Pohl T., Essig A., Marre R., Melchers K.;
RT "The genome sequence of Chlamydia pneumoniae TW183 and comparison with
RT other Chlamydia strains based on whole genome sequence analysis.";
RL Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
Feature:
CHAIN 1 453 DNA repair protein radA homolog.
/FTId=PRO_0000187924.
ZN_FING 11 28 C4-type (Potential).
NP_BIND 93 100 ATP (Potential).
Comments:
-!- FUNCTION: May play a role in the repair of endogenous alkylation
damage (By similarity).
-!- SIMILARITY: Belongs to the recA family. RadA subfamily.
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Sequence length: 453
MATKTKTQWT CNQCGATAPK WLGQCPGCHN WNSLVEEYVP QARSGTSSRS STSAIALSSI
ELENESRIFI DHAGWDRILG GGVVRGSLTL LGGDPGIGKS TLLLQTAERL ASQKYKVLYV
CGEESVTQTS LRAKRLNISS PLIYLFPETN LDNIKQQIAT LEPDILIIDS IQIIFNPTLN
SAPGSVAQVR EVTYELMQIA KSAQITTFII GHVTKSGEIA GPRVLEHLVD TVLYFEGNSH
ANYRMIRSVK NRFGPTNELL ILSMHADGLK EVSNPSGLFL QEKTGPTTGS MIIPIIEGSG
ALLIELQALV SSSPFANPVR KTAGFDPNRF SLLLAVLEKR AQVKLFTMDV FLSITGGLKI
IEPAADLGAL LAVASSLYNR LLPNNSIVIG EVGLGGEIRH VAHLERRIKE GKLMGFEGAI
LPEGQISSLP KEIRENFRLQ GVKTIKDAIR LLL