These proteins given per organism are involved in a DNA repair process;
base-excision repair( GO:0006284 ):

Aeropyrum pernix( 2 entries )

3MGH_AERPE
AGOG_AERPE

Agrobacterium tumefaciens str. C58( 4 entries )

3MGH_AGRT5
FPG_AGRT5
UNG_AGRT5
UVRA_AGRT5

Aquifex aeolicus( 4 entries )

OGG1_AQUAE
UVRA_AQUAE
UVRB_AQUAE
UVRC_AQUAE

Arabidopsis thaliana( 6 entries )

3MG_ARATH
DME_ARATH
DML2_ARATH
DML3_ARATH
ROS1_ARATH
UVH1_ARATH

Archaeoglobus fulgidus( 1 entries )

Bacillus anthracis( 4 entries )

3MGH_BACAN
FPG_BACAN
UNG_BACAN
UVSE_BACAN

Bacillus halodurans( 6 entries )

FPG_BACHD
UNG_BACHD
UVRA_BACHD
UVRB_BACHD
UVRC_BACHD
UVSE_BACHD

Bacillus subtilis( 9 entries )

3MGA_BACSU
3MGH_BACSU
END3_BACSU
FPG_BACSU
UNG_BACSU
UVRA_BACSU
UVRB_BACSU
UVRC_BACSU
UVSE_BACSU

Bifidobacterium longum( 1 entries )

Bordetella bronchiseptica( 1 entries )

Bordetella parapertussis( 2 entries )

FPG_BORPA
UNG_BORPA

Bordetella pertussis( 2 entries )

FPG_BORPE
UNG_BORPE

Borrelia burgdorferi( 5 entries )

3MGH_BORBU
UNG_BORBU
UVRA_BORBU
UVRB_BORBU
UVRC_BORBU

Bradyrhizobium japonicum( 3 entries )

3MGH_BRAJA
FPG_BRAJA
UVRA_BRAJA

Brucella melitensis( 3 entries )

FPG_BRUME
UVRA_BRUME
UVRC_BRUME

Brucella melitensis biovar Suis( 3 entries )

FPG_BRUSU
UVRA_BRUSU
UVRC_BRUSU

Buchnera aphidicola (Schizaphis graminum)( 2 entries )

END3_BUCAP
MUTY_BUCAP

Caenorhabditis elegans( 1 entries )

Campylobacter jejuni( 2 entries )

UNG_CAMJE
UVRB_CAMJE

Chlamydia trachomatis( 4 entries )

UNG_CHLTR
UVRA_CHLTR
UVRB_CHLTR
UVRC_CHLTR

Chlamydophila pneumoniae( 5 entries )

3MGH_CHLPN
UNG_CHLPN
UVRA_CHLPN
UVRB_CHLPN
UVRC_CHLPN

Chlorobium tepidum( 2 entries )

3MGH_CHLTE
UVRC_CHLTE

Clostridium acetobutylicum( 4 entries )

3MGH_CLOAB
UVRA_CLOAB
UVRB_CLOAB
UVRC_CLOAB

Clostridium perfringens( 6 entries )

3MGH_CLOPE
UNG_CLOPE
UVRA_CLOPE
UVRB_CLOPE
UVRC_CLOPE
UVSE_CLOPE

Clostridium tetani( 3 entries )

3MGH_CLOTE
UVRA_CLOTE
UVRC_CLOTE

Corynebacterium efficiens( 3 entries )

3MGH_COREF
FPG_COREF
UNG_COREF

Corynebacterium glutamicum( 3 entries )

3MGH_CORGL
FPG_CORGL
UNG_CORGL

Deinococcus radiodurans( 5 entries )

3MGH_DEIRA
FPG_DEIRA
UNG_DEIRA
UVRA_DEIRA
UVSE_DEIRA

Dictyostelium discoideum( 1 entries )

Drosophila melanogaster( 2 entries )

EXO1_DROME
OGG1_DROME

Encephalitozoon cuniculi( 1 entries )

Escherichia coli( 11 entries )

3MG1_ECOLI
3MG2_ECOLI
CHO_ECOLI
END3_ECOLI
END8_ECOLI
FPG_ECOLI
MUTY_ECOLI
UNG_ECOLI
UVRA_ECOLI
UVRB_ECOLI
UVRC_ECOLI

Escherichia coli O157:H7( 7 entries )

CHO_ECO57
END8_ECO57
FPG_ECO57
UNG_ECO57
UVRA_ECO57
UVRB_ECO57
UVRC_ECO57

Fusobacterium nucleatum subsp. nucleatum( 3 entries )

OGG1_FUSNN
UNG_FUSNN
UVRB_FUSNN

Haemophilus influenzae( 9 entries )

3MGA_HAEIN
END3_HAEIN
FPG_HAEIN
MUTY_HAEIN
TRA_HAEIN
UNG_HAEIN
UVRA_HAEIN
UVRB_HAEIN
UVRC_HAEIN

Helicobacter pylori( 4 entries )

UNG_HELPY
UVRA_HELPY
UVRB_HELPY
UVRC_HELPY

Helicobacter pylori J99( 4 entries )

UNG_HELPJ
UVRA_HELPJ
UVRB_HELPJ
UVRC_HELPJ

Homo sapiens( 9 entries )

3MG_HUMAN
APTX_HUMAN
EXO1_HUMAN
MBD4_HUMAN
OGG1_HUMAN
P53_HUMAN
TDG_HUMAN
UNG2_HUMAN
UNG_HUMAN

Lactobacillus plantarum( 6 entries )

3MGH_LACPL
FPG_LACPL
UNG_LACPL
UVRA_LACPL
UVRB_LACPL
UVRC_LACPL

Lactococcus lactis subsp. lactis( 5 entries )

FPG_LACLA
UNG_LACLA
UVRA_LACLA
UVRB_LACLA
UVRC_LACLA

Leptospira interrogans( 3 entries )

UVRA_LEPIN
UVRB_LEPIN
UVRC_LEPIN

Listeria innocua( 7 entries )

3MGH_LISIN
FPG_LISIN
UNG1_LISIN
UNG2_LISIN
UVRA_LISIN
UVRB_LISIN
UVRC_LISIN

Listeria monocytogenes( 7 entries )

3MGH_LISMO
FPG_LISMO
UNG1_LISMO
UNG2_LISMO
UVRA_LISMO
UVRB_LISMO
UVRC_LISMO

Mesorhizobium loti( 3 entries )

3MGH_RHILO
FPG_RHILO
UVRA_RHILO

Methanocaldococcus jannaschii( 2 entries )

OGG1_METJA
Y613_METJA

Methanopyrus kandleri( 1 entries )

Methanosarcina acetivorans( 2 entries )

UVRB_METAC
UVRC_METAC

Methanosarcina mazei( 2 entries )

UVRB_METMA
UVRC_METMA

Methanothermobacter thermautotrophicus( 1 entries )

Methanothermobacter thermautotrophicus str. Delta H( 4 entries )

OGG1_METTH
UVRA_METTH
UVRB_METTH
UVRC_METTH

Mus musculus( 6 entries )

3MG_MOUSE
EXO1_MOUSE
MBD4_MOUSE
OGG1_MOUSE
P53_MOUSE
UNG_MOUSE

Mycobacterium leprae( 7 entries )

3MGH_MYCLE
END3_MYCLE
FPG_MYCLE
UNG_MYCLE
UVRA_MYCLE
UVRB_MYCLE
UVRC_MYCLE

Mycobacterium tuberculosis( 8 entries )

3MGH_MYCTU
ADA_MYCTU
END3_MYCTU
FPG_MYCTU
UNG_MYCTU
UVRA_MYCTU
UVRB_MYCTU
UVRC_MYCTU

Mycoplasma genitalium( 5 entries )

FPG_MYCGE
UNG_MYCGE
UVRA_MYCGE
UVRB_MYCGE
UVRC_MYCGE

Mycoplasma penetrans( 1 entries )

Mycoplasma pneumoniae( 5 entries )

FPG_MYCPN
UNG_MYCPN
UVRA_MYCPN
UVRB_MYCPN
UVRC_MYCPN

Mycoplasma pulmonis( 5 entries )

FPG_MYCPU
UNG_MYCPU
UVB2_MYCPU
UVRA_MYCPU
UVRB_MYCPU

Neisseria meningitidis (serogroup B)( 5 entries )

FPG_NEIMB
UNG_NEIMB
UVRA_NEIMB
UVRB_NEIMB
UVRC_NEIMB

Neisseria meningitidis serogroup A( 5 entries )

FPG_NEIMA
UNG_NEIMA
UVRA_NEIMA
UVRB_NEIMA
UVRC_NEIMA

Neurospora crassa( 1 entries )

Nostoc sp. PCC 7120( 6 entries )

FPG_ANASP
UVRB_ANASP
UVRC_ANASP
UVSE_ANASP
XISA_ANASP
XISC_ANASP

Oceanobacillus iheyensis( 5 entries )

3MGH_OCEIH
FPG_OCEIH
UNG_OCEIH
UVRA_OCEIH
UVRC_OCEIH

Pasteurella multocida( 5 entries )

FPG_PASMU
UNG_PASMU
UVRA_PASMU
UVRB_PASMU
UVRC_PASMU

Prochlorococcus marinus( 1 entries )

Pseudomonas aeruginosa( 6 entries )

3MGH_PSEAE
FPG_PSEAE
UNG_PSEAE
UVRA_PSEAE
UVRB_PSEAE
UVRC_PSEAE

Pseudomonas putida KT2440( 4 entries )

FPG_PSEPK
UNG_PSEPK
UVRA_PSEPK
UVRC_PSEPK

Pseudomonas syringae pv. tomato( 3 entries )

FPG_PSESM
UNG_PSESM
UVRC_PSESM

Pyrococcus abyssi( 1 entries )

Pyrococcus furiosus( 1 entries )

Pyrococcus horikoshii( 1 entries )

Ralstonia solanacearum( 3 entries )

FPG_RALSO
UNG_RALSO
UVRB_RALSO

Rickettsia conorii( 6 entries )

3MGH_RICCN
END3_RICCN
FPG_RICCN
UVRA_RICCN
UVRB_RICCN
UVRC_RICCN

Rickettsia prowazekii( 5 entries )

3MGH_RICPR
END3_RICPR
UVRA_RICPR
UVRB_RICPR
UVRC_RICPR

Saccharomyces cerevisiae( 10 entries )

APN1_YEAST
DNLI_YEAST
DPOD_YEAST
EXO1_YEAST
MAG_YEAST
NTG1_YEAST
NTG2_YEAST
OGG1_YEAST
PCNA_YEAST
UNG_YEAST

Salmonella typhi( 7 entries )

CHO_SALTI
END8_SALTI
FPG_SALTI
UNG_SALTI
UVRA_SALTI
UVRB_SALTI
UVRC_SALTI

Salmonella typhimurium( 8 entries )

CHO_SALTY
END8_SALTY
FPG_SALTY
MUTY_SALTY
UNG_SALTY
UVRA_SALTY
UVRB_SALTY
UVRC_SALTY

Schizosaccharomyces pombe( 6 entries )

END3_SCHPO
MAG1_SCHPO
MAG2_SCHPO
MYH1_SCHPO
UNG_SCHPO
UVE1_SCHPO

Shewanella oneidensis( 3 entries )

FPG_SHEON
UNG_SHEON
UVRC_SHEON

Shigella flexneri( 4 entries )

CHO_SHIFL
END8_SHIFL
FPG_SHIFL
UVRA_SHIFL

Sinorhizobium melilot( 4 entries )

3MGH_RHIME
FPG_RHIME
UNG_RHIME
UVRA_RHIME

Staphylococcus aureus( 1 entries )

Staphylococcus aureus subsp. aureus MW2( 5 entries )

3MGH_STAAW
UNG_STAAW
UVRA_STAAW
UVRB_STAAW
UVRC_STAAW

Staphylococcus aureus subsp. aureus Mu50( 5 entries )

3MGH_STAAM
UNG_STAAM
UVRA_STAAM
UVRB_STAAM
UVRC_STAAM

Staphylococcus aureus subsp. aureus N315( 5 entries )

3MGH_STAAN
UNG_STAAN
UVRA_STAAN
UVRB_STAAN
UVRC_STAAN

Streptococcus agalactiae serogroup III( 2 entries )

FPG_STRA3
UNG_STRA3

Streptococcus agalactiae serogroup V( 2 entries )

FPG_STRA5
UNG_STRA5

Streptococcus pneumoniae( 5 entries )

FPG_STRPN
UNG_STRPN
UVRA_STRPN
UVRB_STRPN
UVRC_STRPN

Streptococcus pneumoniae R6( 5 entries )

FPG_STRR6
UNG_STRR6
UVRA_STRR6
UVRB_STRR6
UVRC_STRR6

Streptomyces coelicolor( 6 entries )

3MGH_STRCO
FPG_STRCO
UNG1_STRCO
UNG2_STRCO
UVRA_STRCO
UVRC_STRCO

Sulfolobus solfataricus( 1 entries )

Synechocystis sp. PCC 6803( 5 entries )

END3_SYNY3
FPG_SYNY3
UVRA_SYNY3
UVRB_SYNY3
UVRC_SYNY3

Thermoanaerobacter tengcongensis( 2 entries )

UVRB_THETN
UVRC_THETN

Thermoplasma acidophilum( 1 entries )

Thermoplasma volcanium( 1 entries )

Thermotoga maritima( 5 entries )

END3_THEMA
OGG1_THEMA
UVRA_THEMA
UVRB_THEMA
UVRC_THEMA

Treponema pallidum( 4 entries )

END3_TREPA
UVRA_TREPA
UVRB_TREPA
UVRC_TREPA

Tropheryma whipplei str. Twist( 1 entries )

Ureaplasma parvum( 5 entries )

FPG_UREPA
UNG_UREPA
UVRA_UREPA
UVRB_UREPA
UVRC_UREPA

Vibrio cholerae( 4 entries )

FPG_VIBCH
UNG_VIBCH
UVRA_VIBCH
UVRC_VIBCH

Vibrio parahaemolyticus( 5 entries )

FPG_VIBPA
UNG_VIBPA
UVRA_VIBPA
UVRB_VIBPA
UVRC_VIBPA

Vibrio vulnificus( 5 entries )

FPG_VIBVU
UNG_VIBVU
UVRA_VIBVU
UVRB_VIBVU
UVRC_VIBVU

Xanthomonas axonopodis pv. citri( 5 entries )

3MGH_XANAC
FPG_XANAC
UNG_XANAC
UVRA_XANAC
UVRB_XANAC

Xanthomonas campestris pv. campestris( 5 entries )

3MGH_XANCP
FPG_XANCP
UNG_XANCP
UVRA_XANCP
UVRB_XANCP

Xylella fastidiosa( 5 entries )

FPG_XYLFA
UNG_XYLFA
UVRA_XYLFA
UVRB_XYLFA
UVRC_XYLFA

Xylella fastidiosa Temecula1( 5 entries )

FPG_XYLFT
UNG_XYLFT
UVRA_XYLFT
UVRB_XYLFT
UVRC_XYLFT

Yersinia pestis( 5 entries )

FPG_YERPE
UNG_YERPE
UVRA_YERPE
UVRB_YERPE
UVRC_YERPE